DASSIM deep sequencing resistome models diagnostics

Published

11 December 2024

Background

Plot traceplots and MCMC diagnostics for deep sequencing resistome models - this document looks at amr-gene-logreg.stan outputs, the standard random effect models.

Results

Model diagnostics

Figure 1: MCMC model diagnostics

R-hat

Figure 2: MCMC model rhat

Traceplots